Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq64 268 2e-69 seq3 268 2e-69 >seq64 Length=12886 Score = 268 bits (296), Expect = 2e-69 Identities = 227/276 (82%), Gaps = 4/276 (1%) Strand=Plus/Minus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG 103 |||||||| | | | |||| | | || ||||||||| |||||||||||||||||| Sbjct 6174 CTTCACTGTCCGGGACTCGGAGTCGGCGCTGTTACTTTGAGTAAATTAGAGTGTTCAAAG 6115 Query 104 CAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTT 162 ||||||| |||| ||||||||||||||||||||| | ||||||| | | |||| Sbjct 6114 CAGGCCTACGCTCTGAATACATTAGCATGGAATAACACGATAGGACT--CTGGCCTATCC 6057 Query 163 TGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA 222 ||||||| | |||||||| ||||||||||| ||||| ||||||||| | ||||| | Sbjct 6056 TGTTGGTCTGTAGGACCGGAGTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCA 5997 Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282 |||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||| Sbjct 5996 TTGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCATTTGCCAA 5937 Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||| ||||||||||| |||| Sbjct 5936 GGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 5902 >seq3 Length=2414369 Score = 268 bits (296), Expect = 2e-69 Identities = 227/276 (82%), Gaps = 4/276 (1%) Strand=Plus/Minus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG 103 |||||||| | | | |||| | | || ||||||||| |||||||||||||||||| Sbjct 454376 CTTCACTGTCCGGGACTCGGAGTCGGCGCTGTTACTTTGAGTAAATTAGAGTGTTCAAAG 454317 Query 104 CAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTT 162 ||||||| |||| ||||||||||||||||||||| | ||||||| | | |||| Sbjct 454316 CAGGCCTACGCTCTGAATACATTAGCATGGAATAACACGATAGGACT--CTGGCCTATCC 454259 Query 163 TGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA 222 ||||||| | |||||||| ||||||||||| ||||| ||||||||| | ||||| | Sbjct 454258 TGTTGGTCTGTAGGACCGGAGTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCA 454199 Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282 |||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||| Sbjct 454198 TTGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCATTTGCCAA 454139 Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||| ||||||||||| |||| Sbjct 454138 GGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 454104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915196211072