Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq64 297 3e-78 seq3 297 3e-78 >seq64 Length=12886 Score = 297 bits (328), Expect = 3e-78 Identities = 222/258 (86%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5073 CTCGTTGAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 5132 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 |||||||||||||| |||||||||||| | ||||||||||||||||||||| | ||| Sbjct 5133 CTGTTATTGCCTCATGCTTCCATTGGCTAGTCGCCAATAGTCCCTCTAAGAAGTCCGCCG 5192 Query 123 CCAACCATAGTCGATGGGGC--TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | || | || | | ||||||||||| | ||||||||||||||| |||||| | Sbjct 5193 ACTGGCG-AGCCAATCGTGACATATTTAGCAGGCTGAGGTCTCGTTCGTTACCGGAATCA 5251 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5252 ACCTGACAAGGCAACCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 5311 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 5312 AAGAGCTCTCAATCTGTC 5329 >seq3 Length=2414369 Score = 297 bits (328), Expect = 3e-78 Identities = 222/258 (86%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453275 CTCGTTGAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 453334 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 |||||||||||||| |||||||||||| | ||||||||||||||||||||| | ||| Sbjct 453335 CTGTTATTGCCTCATGCTTCCATTGGCTAGTCGCCAATAGTCCCTCTAAGAAGTCCGCCG 453394 Query 123 CCAACCATAGTCGATGGGGC--TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | || | || | | ||||||||||| | ||||||||||||||| |||||| | Sbjct 453395 ACTGGCG-AGCCAATCGTGACATATTTAGCAGGCTGAGGTCTCGTTCGTTACCGGAATCA 453453 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453454 ACCTGACAAGGCAACCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 453513 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 453514 AAGAGCTCTCAATCTGTC 453531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796804334