Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq64 98.7 1e-18 seq3 98.7 1e-18 >seq64 Length=12886 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 6044 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 6101 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 6102 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 6146 >seq3 Length=2414369 Score = 98.7 bits (108), Expect = 1e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | ||||||| ||||| | ||||||| | ||||||||||||||||||||| Sbjct 454246 CTACAGACCAACAGGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAATGTATTCA 454303 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | ||||| ||||||||||||||||||||||| ||||| |||| || Sbjct 454304 GAGCGTAGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAACAG 454348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197612876