Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq64 154 2e-35 seq3 154 2e-35 >seq64 Length=12886 Score = 154 bits (170), Expect = 2e-35 Identities = 145/181 (80%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| ||| Sbjct 6146 CTGTTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCAT 6087 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 ||||||| | ||||||| | | |||| ||| ||| | |||||||| ||||||| Sbjct 6086 GGAATAACACGATAGGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGA 6030 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| ||||||| |||||||||||||||||||| Sbjct 6029 TTAAGAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTA 5970 Query 190 T 190 | Sbjct 5969 T 5969 >seq3 Length=2414369 Score = 154 bits (170), Expect = 2e-35 Identities = 145/181 (80%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| ||| Sbjct 454348 CTGTTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCAT 454289 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 ||||||| | ||||||| | | |||| ||| ||| | |||||||| ||||||| Sbjct 454288 GGAATAACACGATAGGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGA 454232 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| ||||||| |||||||||||||||||||| Sbjct 454231 TTAAGAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTA 454172 Query 190 T 190 | Sbjct 454171 T 454171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997946560