Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq64 268 2e-69 seq3 268 2e-69 >seq64 Length=12886 Score = 268 bits (296), Expect = 2e-69 Identities = 234/285 (82%), Gaps = 11/285 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTG---GCGGGTCGCCGG-CTTC 75 || |||||||| | ||||||||||| | | || || | || |||| ||| |||| Sbjct 5238 GAACGAGACCTCAGCCTGCTAAATAT---GTCACGATTGGCTCGCCAGTCGGCGGACTTC 5182 Query 76 TTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 ||||||||||||| ||| | |||| ||||||| ||||||||||||||||||||||||| Sbjct 5181 TTAGAGGGACTATTGGCGACTAGCCAATGGAAGCATGAGGCAATAACAGGTCTGTGATGC 5122 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 |||||||||||||||||||||||||||||||||||| | ||||||| | | |||| Sbjct 5121 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAG--CCTAGCCTT 5064 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 ||||| ||| | |||||||||| | ||||| ||||| |||||||||| |||||||| Sbjct 5063 GGCCGAGAGGCCCGGGTAATCTT-TGAAACTGCATCGTGATGGGGATAGATTATTGCAAT 5005 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 |||| |||||||||||||||||||||||||||| ||||||||| Sbjct 5004 TATTAATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGC 4960 >seq3 Length=2414369 Score = 268 bits (296), Expect = 2e-69 Identities = 234/285 (82%), Gaps = 11/285 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTG---GCGGGTCGCCGG-CTTC 75 || |||||||| | ||||||||||| | | || || | || |||| ||| |||| Sbjct 453440 GAACGAGACCTCAGCCTGCTAAATAT---GTCACGATTGGCTCGCCAGTCGGCGGACTTC 453384 Query 76 TTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 ||||||||||||| ||| | |||| ||||||| ||||||||||||||||||||||||| Sbjct 453383 TTAGAGGGACTATTGGCGACTAGCCAATGGAAGCATGAGGCAATAACAGGTCTGTGATGC 453324 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 |||||||||||||||||||||||||||||||||||| | ||||||| | | |||| Sbjct 453323 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAG--CCTAGCCTT 453266 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 ||||| ||| | |||||||||| | ||||| ||||| |||||||||| |||||||| Sbjct 453265 GGCCGAGAGGCCCGGGTAATCTT-TGAAACTGCATCGTGATGGGGATAGATTATTGCAAT 453207 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 |||| |||||||||||||||||||||||||||| ||||||||| Sbjct 453206 TATTAATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGC 453162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196078592