Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3 352 9e-95 seq64 181 3e-43 >seq3 Length=2414369 Score = 352 bits (390), Expect = 9e-95 Identities = 219/234 (94%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 203 TAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAG 262 |||| ||||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct 447318 TAAGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTATTCTACACCTCCTAAG 447374 Query 263 TCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC 322 ||||||||||||| | |||||||||||| |||||||||||||||||||||||||| || Sbjct 447375 TCATTTCACAAAGACAGACTAGAGTCAAACTCAACAGGGTCTTCTTTCCCCGCTGTTTTT 447434 Query 323 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 382 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447435 TCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 447494 Query 383 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447495 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 447548 Score = 181 bits (200), Expect = 3e-43 Identities = 105/107 (98%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448126 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 448185 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540 |||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 448186 GACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC-CTTT 448231 Score = 154 bits (170), Expect = 5e-35 Identities = 108/123 (88%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| |||||||| |||||| |||| | ||||||||||||||||||| Sbjct 446619 CTTTTGTTCTACACGAGATTTCCGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 446678 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||| Sbjct 446679 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCACCTGGATC 446738 Query 127 GGC 129 ||| Sbjct 446739 GGC 446741 >seq64 Length=12886 Score = 181 bits (200), Expect = 3e-43 Identities = 105/107 (98%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 483 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 542 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540 |||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 543 GACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC-CTTT 588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635193230272