Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq64 91.5 2e-16 seq3 91.5 2e-16 >seq64 Length=12886 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 12072 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 12016 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 12015 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 11956 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 11955 GGAGCGGGGTCAT 11943 >seq3 Length=2414369 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 445774 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 445718 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 445717 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 445658 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 445657 GGAGCGGGGTCAT 445645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196714496