Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2029 269 7e-70 seq288 147 6e-33 >seq2029 Length=64692 Score = 269 bits (298), Expect = 7e-70 Identities = 305/408 (75%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 50583 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 50642 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | ||| | ||| Sbjct 50643 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTAAAAAGTCTCCTGT 50702 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||| | |||||||||| || ||| | ||| | ||||||| || || Sbjct 50703 CAAAGATCAGGGCTTAACCCTGGGCCGGCAGGAGAAACTCTTAGGCTAGAGTTTGGTAGG 50762 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||||| ||| ||| |||||||||||||| || ||||||||||||| || Sbjct 50763 GGCAGAGGGAATTCCCGGTGGAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAAAGG 50822 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| | |||||| || | ||||||||| |||||||||| | Sbjct 50823 CGAAAGCACTCTGCTGGGCCATAACTGACACTGAGAGACGAAAGCGAGGGGAGCAAAAGG 50882 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG--GATTTA 360 |||||||||||| ||||||| |||| |||||||| ||||| ||||||| | || | Sbjct 50883 GATTAGATACCCCTGTAGTCCTCGCCGTAAACGATGGATACTAGATGTTGGGTAGGTTAA 50942 Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408 | || ||| ||||||||||||||||||| ||||||||||| || Sbjct 50943 ATCACTCAGTATCGTAGCTAACGCGTGAAGTATCCCGCCTGGGGAGTA 50990 >seq288 Length=17438 Score = 147 bits (162), Expect = 6e-33 Identities = 135/171 (79%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 ||||||||| || ||||| | ||||||||| | |||| || |||| || ||||| Sbjct 8651 ACTAGAGTGAGTAAGAGGAGAATGGAATTCCTGGCGTAGAGGTAAAATTTGTTGATATCA 8592 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 ||||||||||||| ||||||||| | |||||| |||||||| | | | |||||| Sbjct 8591 GGAGGAACACCAAAAGCGAAGGCAATTCTCTGGGACTCCACTGACGTTGAGGTGCGAAAG 8532 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||| ||||||||||||| |||||||||||| | |||||| Sbjct 8531 CGTGGGGAGCAAAGGGGATTAGATACCCCCGTAGTCCACGCCGTCAACGAT 8481 Score = 78.8 bits (86), Expect = 2e-12 Identities = 66/81 (81%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 || ||| ||||| || |||||||||||||||||||||||| || || ||||||| Sbjct 8878 AAAAAGTCCCGGCCAATCTCGTGCCAGCAGCCGCGGTAATACGAGAGGGGCGAGCGTTAT 8819 Query 72 TCGGAATTACTGGGCGTAAAG 92 ||||||| | ||||||||||| Sbjct 8818 TCGGAATGATTGGGCGTAAAG 8798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289553574400