Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq2029 96.9 4e-18 >seq2029 Length=64692 Score = 96.9 bits (106), Expect = 4e-18 Identities = 127/173 (73%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-T 80 || |||| |||||| || | ||| || ||||| |||| || ||| || | | | | Sbjct 54258 CGTAAACCGACACAGGTGGGTTGGTAGAGTATACCAAGGGGCGCGAGATAA-CTCTCTCT 54316 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC----TACCCAGAAA 136 |||||||| |||||| | |||| |||||||||||| || |||| || || || ||| Sbjct 54317 AAGGAACTCGGCAAAATAACCCCGTAACTTCGGGAGAAGGGGTGCCAAGTAACTCAAAAA 54376 Query 137 TGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 54377 TGCTTGGTCGCAGTGACCAGGCCCTGGCGACTGTTTATCAAAAACACAGGTCT 54429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531181474400