Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2029 96.9 3e-18 seq3559 86.0 6e-15 >seq2029 Length=64692 Score = 96.9 bits (106), Expect = 3e-18 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| |||||||||||| |||||||||| ||| ||||| || Sbjct 54382 GGTCGCAGTGACCAGGCCCTGGCGACTGTTTATCAAAAACACAGGTCTCCGCAAAGTCGT 54441 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||| ||| |||||||||||| ||||||||||||||| Sbjct 54442 AAGACAACATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 54487 >seq3559 Length=35662 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| ||||||| || | || |||||||||||| ||| Sbjct 29229 GCGACTGTTTACTAAAAACACAGGACTCTGCTAAGTGGTAACACGACGTATAGGGTCTGA 29288 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||| |||| Sbjct 29289 CACCTGCCCGGTGCTGGAAACTTAA 29313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476783371600