Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2029 331 2e-88 seq3559 197 3e-48 seq354 78.8 2e-12 >seq2029 Length=64692 Score = 331 bits (366), Expect = 2e-88 Identities = 293/359 (82%), Gaps = 14/359 (4%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | |||||||||||| |||||| Sbjct 54673 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCTGATCGTT 54614 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 54613 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 54554 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGT--TCA-CTGCT--TCGATTGCTCTAACA 181 ||||||||||||||||| || ||||||| ||| ||| || || | | || |||| Sbjct 54553 TAGTTACGGCCGCCGTTCACCGGGGCTTCAGTCGTCAGCTTCTCCACAAATG-AATAACC 54495 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 | | |||||||||| |||| |||||||||||||| || ||| | ||||| |||||| Sbjct 54494 AACTTCTTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATGTTGTCTTACGACTT 54435 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT- 300 || || ||||||||||||| ||||||||||| |||||| || ||||| || ||| Sbjct 54434 TGCGGAGACCTGTGTTTTTGATAAACAGTCGCCAGGGCCTGGTCACTGCGACCAAGCATT 54375 Query 301 ----AG--AC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || || ||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 54374 TTTGAGTTACTTGGCACCCCTTCTCCCGAAGTTACGGGGTTATTTTGCCGAGTTCCTTA 54316 >seq3559 Length=35662 Score = 197 bits (218), Expect = 3e-48 Identities = 219/297 (74%), Gaps = 30/297 (10%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||| ||| || | ||||||||| || |||| Sbjct 29525 GCATCTTCACGGAGAATTCAATTTCACTGAGATCATGTTGGAGACAGTGGGGAAGTCGTG 29466 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 29465 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 29406 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT---CGATT----------- 172 ||||||||||||||||||||||| ||| || | |||| |||| Sbjct 29405 GAGTTACGGCCGCCGTTTACTGGGCCTTGCATTTAGAGCTTGTCTGATTCTCAAAATTAG 29346 Query 173 ----GCTCTAACAGA------------TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCA 216 || | | ||| ||| |||| ||||||||||||||||| |||| Sbjct 29345 AACAACTTTGAGAGAGAGATGCACCCTTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCA 29286 Query 217 GCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 | ||||||| |||| || | |||||||||| ||||||||||| |||||||||||| Sbjct 29285 GACCCTATACGTCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 29229 >seq354 Length=11012 Score = 78.8 bits (86), Expect = 2e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACC 94 |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8214 GAGACAGTGCCCTGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACC 8261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062361753600