Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 206 5e-51
seq3559 134 3e-29
>seq2029
Length=64692
Score = 206 bits (228), Expect = 5e-51
Identities = 182/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172
|||| | |||| |||||||||||||||||||||| ||||| ||| |||||||||| |
Sbjct 54862 GACATTTTCAGGTGGGCAGTTTGACTGGGGCGGTCACCTCCTAAAAGGTAACGGAGGTGT 54921
Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232
||||| | ||||||| |||| ||||| || || | |||| ||||||| ||||| | |
Sbjct 54922 GCAAAGGTTCCCTCAGGCTGGACGGAAATCAGCCGTAGAGTGTAAAGGCAGAAGGGAGCT 54981
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
||||||| | ||| |||||| ||||||| |||||| ||| |||| ||||||| |||| |
Sbjct 54982 TGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTTC 55041
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 55042 CATGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 55088
>seq3559
Length=35662
Score = 134 bits (148), Expect = 3e-29
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|| ||||||| | ||| |||||||||||||||||||| ||| ||||||||||||| |
Sbjct 29749 GGAACAGTGTTAAATGGGTAGTTTGACTGGGGCGGTCGCTTCCTAAAGAGTAACGGAAGT 29808
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
| | ||| || |||| |||| ||||| || | | || | || || | ||| ||
Sbjct 29809 GTGCGAAGGTAAGCTCAAGCTGGACGGAAATCAGCTGGAGAGCGTAATGGTAGAAGCTTG 29868
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
|||||| | || |||||| ||||| |||||||||||| | || ||| |||| ||
Sbjct 29869 CCTGACTGTAAGACTTACAAGTCAAGCAGAGACGAAAGTCGGCCATAGTGACCCGGGAGT 29928
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||||| ||| ||| || |||||| |||| ||| || ||||||
Sbjct 29929 TCTTGGTGGAAAGGCTCTCGATCAACGGATCAAAGGTACGCTAGGGATA 29977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982364633600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |