Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq2029 233 4e-59 seq288 170 4e-40 >seq2029 Length=64692 Score = 233 bits (258), Expect = 4e-59 Identities = 235/304 (77%), Gaps = 15/304 (5%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| | || ||||||| | || || || |||||||||||||||||| Sbjct 50521 GGCATTGCTCCGTCAGGCTGTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 50462 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| ||| Sbjct 50461 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 50402 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| || |||| ||||||||| | |||||| ||||| ||||||||| | Sbjct 50401 CATTGCCTTGGTAAGCCATTACCTCACCAACAAGCTAATCAGCCGCAAGCCCATCTATTG 50342 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 ||||| ||| || | | | ||| | || || | ||||||||| || Sbjct 50341 GCGAT-----TTT--------CATCTTTCACTTCTCAG-CAATACGAGGTATTAGCCATC 50296 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||| || ||| ||||| ||||| || ||||||||||||||||||||| Sbjct 50295 GTTTCCAATGGTTATCCCTCTCCAAAAGGTAGGTT-CTTACGTGTTACTCACCCGTCCGC 50237 Query 301 CACT 304 |||| Sbjct 50236 CACT 50233 >seq288 Length=17438 Score = 170 bits (188), Expect = 4e-40 Identities = 142/171 (83%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| |||||| || |||||||||| | || | | |||| Sbjct 8955 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGCCGCTCGAAAGCGTCT 9014 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||||| ||| |||||||| || |||| |||| | || Sbjct 9015 GGGCCGTGTCTCAGTCCCAGTGTGGCCGATCATCCTCTCAGACCAGCTAAGGATCTTTGG 9074 Query 127 CTTGGTGGGCTATTA-TCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176 |||||| |||| ||| ||| ||||||||||||||| ||| ||| ||||| Sbjct 9075 CTTGGTAGGCTTTTACTCT-ACCAACTACCTAATCCTACGCAAGCTCATCT 9124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998364057600