Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq2029 194 3e-47 seq288 82.4 1e-13 >seq2029 Length=64692 Score = 194 bits (214), Expect = 3e-47 Identities = 217/290 (75%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||| |||||||| ||||| |||||||| | |||||| || |||||| |||||| Sbjct 50872 CCCTCGCTTTCGTCTCTCAGTGTCAGTTATGGCCCAGCAGAGTGCTTTCGCCTTTGGTGT 50813 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||||||| ||| |||||||| |||| || | || Sbjct 50812 TCCTCCCGATCTCTACGCATTTCACCGCTCCACCGGGAATTCCCTCTGCCCCTACCAAAC 50753 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||| ||| ||| ||||| ||||| | ||| ||| |||| Sbjct 50752 TCTAGCCTAAGAGTTTCTCCTGCCGGCCCAGGGTTAAGCCCTGATCTTTGACAGGAGACT 50693 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | || |||||| | |||||| |||||| | |||||||||||||||| ||| | Sbjct 50692 TTTTAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTG 50633 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | ||||||||||||||||||| ||||||||| ||||||||||||| || Sbjct 50632 TCTTACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATA 50583 >seq288 Length=17438 Score = 82.4 bits (90), Expect = 1e-13 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 192 CTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGG 251 |||| || |||||| |||||| | |||| |||||||| ||| | ||||||||||||| Sbjct 8789 CTACGTGCTCTTTACGCCCAATCATTCCGAATAACGCTCGCCCCTCTCGTATTACCGCGG 8848 Query 252 CTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286 ||||||||||| || |||| | ||| || |||| Sbjct 8849 CTGCTGGCACGAGATTGGCCGGGACTTTTTTCTCA 8883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828771095600