Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2029 138 2e-30 seq3559 89.7 9e-16 >seq2029 Length=64692 Score = 138 bits (152), Expect = 2e-30 Identities = 180/243 (74%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 || |||| ||| ||| || || ||||||||| ||| | | | ||| | ||| |||| Sbjct 52648 GGCGGATACCTAGGCACCTAGAGACGATGAAGGGCGTGGAACCGA-CGAAACGCTTCGGG 52706 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| | ||||| | ||||||| ||||| |||||| ||| |||| ||| || Sbjct 52707 GAGCTGG-AAACAAGCAATGATCCGGAGATTCCCGAATAGGGCAACCT----CTT---GT 52758 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 || | |||||| ||||||| | || || ||| | | |||||||||||||| ||| Sbjct 52759 ACTTCTAA-CTGAATTCATAGGTTAGAAAGAGGCAACTCAGTGAACTGAAACATCTTAGT 52817 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||| || Sbjct 52818 AGCTGAAGGAAAAGAAAGCAAACGCGATTCCCTGAGTAGTGGCGAGCGAAATGGGAACAG 52877 Query 249 CCT 251 ||| Sbjct 52878 CCT 52880 >seq3559 Length=35662 Score = 89.7 bits (98), Expect = 9e-16 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||||||||||||||||||| || ||||| ||||||||||||| ||| ||||||||| Sbjct 27689 GAACTGAAACATCTAAGTAACTAGAGGAACTCAAATCAACCGAGACTCCGTAAGTAGTGG 27748 Query 231 CGAGCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA-TAGTGGAATC-CTCTGGA 288 |||||||| |||| || | || | | || | || | ||| ||| | | |||| Sbjct 27749 TGAGCGAAAACGGATTAGGCCTTCATTGTTTTTTAATTTTACAAGTTGAAGCTGTTTGGA 27808 Query 289 AATAGGAGCCATAGCGGGTGATAGCCCCGTA 319 || | | |||| || | |||||||||| ||| Sbjct 27809 AAAACGCGCCAAAGAGAGTGATAGCCCTGTA 27839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918366937600