Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3230 109 2e-21 seq3252 95.1 4e-17 >seq3230 Length=3662 Score = 109 bits (120), Expect = 2e-21 Identities = 96/117 (82%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 180 TCATTGATTAAGTaaaaaaaCGAT--AAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 |||| || |||||||| || || | ||| ||||||||||| || || ||||| | Sbjct 113 TCATGGAATAAGTAAATAA-CGTTTGAAGAATAGTGGTATTTTACCGGCCCCGAATC--- 58 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 57 TCCCACTTATTCTACACCTCCTGAGTCATTTCACAAAGTCGGACTAGAGTCAAACTC 1 >seq3252 Length=18086 Score = 95.1 bits (104), Expect = 4e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 377 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| Sbjct 18086 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTGGGTGACGAGGCACTTGGCTACCTC 18027 Query 437 AA 438 || Sbjct 18026 AA 18025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635141132800