Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq538 93.3 3e-14
>seq538
Length=19016
Score = 93.3 bits (102), Expect = 3e-14
Identities = 128/177 (72%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345
|| |||| ||| ||||||||||||||||||||||| ||||| ||||||| |||||||
Sbjct 16322 CGCAGGCCCGTGCCTTCTACGGCTTCCAGATTGCCATTGAGAACATCCACTCCGAGATGT 16381
Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGG--AGCGGGCGGAACGTGAACGATTGTTCAA 61403
|||| | || | || |||||||||| || ||| | ||| | ||| |||| |
Sbjct 16382 ACAGCTTGCTTCTGGAGACGTACATCAAGGACAGCCAGGAGAAGGAGAA--GCTGTTTCA 16439
Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGAT 61460
||||| |||||| | || | |||| ||| ||| | ||||| | || |||||
Sbjct 16440 CGCCATGGAGACGGTGCCTGTGGTGCGCAAGAAGGCGCACTGGGCAATGAAGTGGAT 16496
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737
|||||||||||| ||||||||| |||||||||| | ||||| |||| ||| | |
Sbjct 17092 GAGGAGCGTGTGTCTGAGATTGTGAGTGAGGCGGTTGCCATCGAGAAGGAGTTTATCTGT 17151
Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797
||||| ||||||| | ||||||||||| | || ||| |||||| |||||
Sbjct 17152 GACGCGCTGCCCGTGGATTTGATCGGCATGAACAAGGTGCTGATGGGGCAGTACATTGAG 17211
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTA---TGAAGCGGATCTATAATACGAAA 61854
|| ||| ||||| ||| | || | |||| | |||| | || || | |
Sbjct 17212 TTCTGTGCGGACCGGCTGCTAGTGGCGCTGGGCAACCCCAAGCAG---TACAACATGGCC 17268
Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCT 61886
||||| ||||| | ||||||||||| |||||
Sbjct 17269 AACCCCTTTGACTGGATGGACATGATCTCGCT 17300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397550556704000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |