Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 581 4e-161
>seq2029
Length=64692
Score = 581 bits (644), Expect = 4e-161
Identities = 755/1034 (73%), Gaps = 21/1034 (2%)
Strand=Plus/Minus
Query 161514 GTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGGTCTGG 161573
||| ||||| |||| ||||||||| || || |||||||||||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 161574 ACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTT 161633
| ||| | || || ||||| |||||||| |||| |||||| |||| || || || ||
Sbjct 63319 GTTACTTTTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACATT 63260
Query 161634 CGCTACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGG-TGCAAATTTTC 161692
| || |||||||| ||||| | |||| ||| ||| | || || || || ||||
Sbjct 63259 TGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAA--TTTC 63202
Query 161693 TTA-CAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGG 161751
||| | || || ||| |||||||| | ||||||||||||| | | |||| |||
Sbjct 63201 TTAACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGG 63142
Query 161752 GGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTT 161811
|| || || |||||||| ||||| | ||| ||||||||| || || |||| |||
Sbjct 63141 GGCCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTC 63082
Query 161812 GTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTTGCT 161871
|| || || ||||| |||| | |||||||| || ||||||||||| |||||| |||||
Sbjct 63081 GTAGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCT 63022
Query 161872 CGTCTTATCGGTA----TCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGT 161927
||| || ||| | ||||| || || || |||||||| |||| ||| ||| ||||
Sbjct 63021 CGT----TCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGT 62966
Query 161928 TTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGCGCCATC 161987
||| || || || || || || || | || || || |||||||| || |||
Sbjct 62965 TTTCGTTTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAG 62906
Query 161988 GTTTGGGGTTGCCGCTATTTTCAGGTT---CTTACTTTTCCTACAAGGTTTCCACAATTG 162044
||||| ||||| || |||||| | || |||| |||| | |||| ||||| || ||
Sbjct 62905 TTTTGGTGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTC---AAGGCTTCCATAACTG 62849
Query 162045 GACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTC 162104
||| | || || ||||| ||||||||||| || ||| | | || | ||| || || |
Sbjct 62848 GACTTTAAACCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTG 62789
Query 162105 TGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAAATAC 162164
|| ||||| |||| ||||| |||||||| || | |||||||||| ||||| ||
Sbjct 62788 CGCCATTCATGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACAC 62729
Query 162165 TTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCG 162224
||| || ||| || | || |||| || || || ||||| ||||| ||||| ||| |
Sbjct 62728 ATTCCGTGCGTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAG 62669
Query 162225 TTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTAT 162284
|| ||||| || ||||| ||| | |||||| |||||| |||||||| || ||||||||
Sbjct 62668 ATTTTGGTCTCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTAT 62609
Query 162285 GCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCT 162344
||| || ||||| || | || || |||| ||| |||| ||| | | || || ||| |
Sbjct 62608 GCTTTTTGTTCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCT-T 62550
Query 162345 TAATCTT-CGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAAT 162403
||| ||| ||||||||||| || || || || || ||||| || || || ||||| ||||
Sbjct 62549 TAAACTTACGTGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAAT 62490
Query 162404 TTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCAC 162463
||||||| ||||| ||||| |||||||| || || |||||| ||||||| ||| ||||
Sbjct 62489 TTGAAACTTTCTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTG 62430
Query 162464 CAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACG 162523
| ||||| || ||||| || |||||||||||||||| ||| | || | || ||||
Sbjct 62429 CTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACG 62370
Query 162524 CACTGTGAATGGTT 162537
| || | |||||||
Sbjct 62369 CTCT-TTAATGGTT 62357
Score = 390 bits (432), Expect = 1e-103
Identities = 403/525 (77%), Gaps = 2/525 (0%)
Strand=Plus/Minus
Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862
|| || |||||||| ||| || | ||||| | || |||||||||| || || |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921
||||| || ||| | || | |||||| || | || ||| |||| || ||||| || ||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCACC 32628
Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981
||||| || |||||||| |||||||| || || |||||||||| | ||||| |||||
Sbjct 32627 TCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAA 32568
Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041
|||||| |||||||| || |||| |||| |||||||| ||| | || ||||| || ||
Sbjct 32567 CATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTAT 32508
Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101
||||||||| || || || ||||| ||| | || ||||||||||||| |||||| | ||
Sbjct 32507 TTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGT 32448
Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161
| || ||| | | || |||| | | || |||||||||||||||||| | |||| |||
Sbjct 32447 TTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCG 32388
Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221
| | ||||||||||| ||||| ||||| ||||| || ||||| ||||| || | ||
Sbjct 32387 TTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGC 32328
Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281
||||||| || ||||||| ||||||| ||||||||||| |||| ||||||| | |||||
Sbjct 32327 TGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 32268
Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAA 160326
|||||||| ||||||| ||| | ||||||||||| || || ||
Sbjct 32267 TTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 354 bits (392), Expect = 9e-93
Identities = 348/449 (78%), Gaps = 0/449 (0%)
Strand=Plus/Minus
Query 160325 AATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTG 160384
|| || || ||||| || ||||| ||||| || ||||| || ||||| ||||| || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 160385 TTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACT 160444
|||||||||||||| || || || || |||||| ||| | | || || || || |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 160445 GAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCA 160504
|| || ||| | |||||||| ||||||||||| ||||| |||||||||||||| |||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 160505 GCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCT 160564
|| |||||||||||||||||||| || |||||||| || || ||||||||||| || ||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 160565 CTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTT 160624
| || |||||| | ||||||||||| |||||||| || ||||| ||||| | ||| ||
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 160625 TCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAA 160684
|| || ||||| ||||| | |||||||||||||||||||| || | | || |||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 160685 GGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTC 160744
|| | ||| | ||||||||||| ||| | | ||||| || || || ||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 160745 ATGCACGAGCGTAACGCTCACAACTTCCC 160773
||||| |||||||||||||||||||||||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCC 30852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551351188080000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |