Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq18 100 3e-19 >seq18 Length=145863 Score = 100 bits (110), Expect = 3e-19 Identities = 125/167 (75%), Gaps = 7/167 (4%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAA 82 ||||| |||||| |||| |||| || |||| ||| || ||| || | | | ||| Sbjct 35929 CAAACCGACACAGGTAGGTGGGTAGAGAATACCTAGGGGCGCGAGATAA-CTCTCTCTAA 35871 Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAG 142 |||||| |||||| || ||| |||||||||||| || |||| || ||| || || | Sbjct 35870 GGAACTCGGCAAAATGGCCCCGTAACTTCGGGAGAAGGGGTGCC--CCCGCAA---GGGG 35816 Query 143 GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || ||| |||||| |||||||| |||||||||||| || Sbjct 35815 GCCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCT 35769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531199454524