Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 2e-14 seq15 80.6 3e-13 >seq18 Length=145863 Score = 84.2 bits (92), Expect = 2e-14 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| || || || ||| || | Sbjct 35806 ACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCCGCTAAGTCGCAAGACAACAT 35747 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| ||||||||||||||||||||||||| || Sbjct 35746 ATGGGGGCTGACGCCTGCCCGGTGCCGGAAGGTGAA 35711 >seq15 Length=69663 Score = 80.6 bits (88), Expect = 3e-13 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||| ||||| | || ||||||| |||| ||| Sbjct 45410 GCGACTGTTTAATAAAAACACAGGACTCAGCAAAGTGGCAACACGACGTATTGGGTCTGA 45469 Query 128 CGCCTGCCCGGTGCCGG 144 |||||||||||||| || Sbjct 45470 CGCCTGCCCGGTGCTGG 45486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476799510386