Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq89 82.4 4e-14 seq88 82.4 4e-14 >seq89 Length=1719426 Score = 82.4 bits (90), Expect = 4e-14 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC- 59 ||| ||||||||||||||||||||| |||| ||||||| |||| |||||||||||| | Sbjct 1245269 GGAGAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAAGAGCCCAACT 1245210 Query 60 GCCGAATCCCCGCCCCGCGG 79 |||| ||||||||||| Sbjct 1245209 TGAAAATCTCCGCCCCGCGG 1245190 Score = 82.4 bits (90), Expect = 4e-14 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC- 59 ||| ||||||||||||||||||||| |||| ||||||| |||| |||||||||||| | Sbjct 1293545 GGAGAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAAGAGCCCAACT 1293604 Query 60 GCCGAATCCCCGCCCCGCGG 79 |||| ||||||||||| Sbjct 1293605 TGAAAATCTCCGCCCCGCGG 1293624 >seq88 Length=702383 Score = 82.4 bits (90), Expect = 4e-14 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC- 59 ||| ||||||||||||||||||||| |||| ||||||| |||| |||||||||||| | Sbjct 588470 GGAGAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAAGAGCCCAACT 588529 Query 60 GCCGAATCCCCGCCCCGCGG 79 |||| ||||||||||| Sbjct 588530 TGAAAATCTCCGCCCCGCGG 588549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230399771040