Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq92 73.4 6e-11 >seq92 Length=1443051 Score = 73.4 bits (80), Expect = 6e-11 Identities = 109/155 (70%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 || || || ||||| | |||||||| || || || | ||||| ||||| ||||||||| Sbjct 1388342 GGGGCCTCCTCCAGGAGCTTCTGGTTGCGGCGCTGGATGGAGCAGTCGCGCTCGCCCAGG 1388401 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTC 186 |||||| ||| ||| || ||| | || || || | || | ||| || ||||| | Sbjct 1388402 TGGATGACGTTGCCGTGCTTGTCCGCGAGCACCTGGAACTCGATGTGGCGCGGGTTCTGC 1388461 Query 187 AGGTACTTTTCCAGGTAGACCATCGGGTTGCCGaa 221 | ||| |||||||| ||| | |||||||| Sbjct 1388462 ACATACCGCTCCAGGTACACCTTGCCATTGCCGAA 1388496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735999244220