Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq92 91.5 2e-16 seq89 91.5 2e-16 seq88 91.5 2e-16 >seq92 Length=1443051 Score = 91.5 bits (100), Expect = 2e-16 Identities = 79/96 (82%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGCGT 70 |||||||| ||||| | ||||||| | |||||||||||||| |||||| |||| Sbjct 143482 ACCAACAAGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAACGTATTCAAGGCGG 143539 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 143540 ATGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 143575 >seq89 Length=1719426 Score = 91.5 bits (100), Expect = 2e-16 Identities = 79/96 (82%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGCGT 70 |||||||| ||||| | ||||||| | |||||||||||||| |||||| |||| Sbjct 1247031 ACCAACAAGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAACGTATTCAAGGCGG 1247088 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 1247089 ATGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 1247124 Score = 91.5 bits (100), Expect = 2e-16 Identities = 79/96 (82%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGCGT 70 |||||||| ||||| | ||||||| | |||||||||||||| |||||| |||| Sbjct 1291783 ACCAACAAGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAACGTATTCAAGGCGG 1291726 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 1291725 ATGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 1291690 >seq88 Length=702383 Score = 91.5 bits (100), Expect = 2e-16 Identities = 79/96 (82%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGCGT 70 |||||||| ||||| | ||||||| | |||||||||||||| |||||| |||| Sbjct 586708 ACCAACAAGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAACGTATTCAAGGCGG 586651 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 586650 ATGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 586615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199388804