Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20LA000219_20[genbank_20GCA_5F000812005.1_202015-01- 02] 106 sequences; 48,546,496 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq15 100 2e-19 >seq15 Length=69663 Score = 100 bits (110), Expect = 2e-19 Identities = 121/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| ||||||| ||| | | || ||||| ||||| ||||| || || Sbjct 50781 TCGAGTTGCAGAGAGCAATCCGAACTGAGGCGAC-TTTTCTAGGATTCGCTCCGACTTGC 50723 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | || |||| ||| |||||||| ||||||| ||||| |||||||||| | Sbjct 50722 ATCATTGCTTCCCTTTGTGGTCGCCATTGTAACACGTGTGTAGCCCAGCCCATAAGGGTC 50663 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||| |||||||||| |||| | ||||||||| || | |||| Sbjct 50662 ATGACGACTTGACGTTATCCTCGCCTTCCTCCTGTATATCAC 50621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415999572820