Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1907 325 6e-87 >seq1907 Length=1325 Score = 325 bits (360), Expect = 6e-87 Identities = 216/236 (92%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 186 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 243 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||| || ||||||||| ||||||||||||||||||| | |||||||||||| Sbjct 244 CTCGTTGAAGATGAATAATTGCAATCATCTATCCCCATCACGATGCAGTTTCAAAGATTA 303 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||||||||||||||| ||| |||||||| | |||||||||||||||||||||| Sbjct 304 CCCGGACCTGTCGGCCAAGGC--TAGGCTCGTTGATTGCATCAGTGTAGCGCGCGTGCGG 361 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 ||||||||||||||||||||||||||||||||||||||||| |||||| | | ||| Sbjct 362 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCACACTTCCATTGGCTA 417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751828139565