Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1907 266 6e-69 >seq1907 Length=1325 Score = 266 bits (294), Expect = 6e-69 Identities = 208/245 (85%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 1071 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 1012 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||||| | | |||| |||||||| | | |||||| ||||||||||| Sbjct 1011 ATAACACGATAGGACT--CTGGCCTATCTTGTTGGTCTGTGGGACCGGAGTAATGATTAA 954 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| | Sbjct 953 GAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAA 894 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||||||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 893 AGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 835 Query 314 AGGGG 318 |||| Sbjct 834 GGGGG 830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914984095168