Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq3689 82.4 8e-14 >seq3689 Length=887 Score = 82.4 bits (90), Expect = 8e-14 Identities = 120/170 (71%), Gaps = 5/170 (3%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| ||||| || | |||| | || || |||||| | ||| || || | | |||| Sbjct 433 AAACCAACACAGGTGAACTGGTTTAGTAAACCAAGGCGATAGAGAAAACCATGTTGAAGG 374 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-----CCAGAAATGG 139 |||| |||||| |||| | ||||||||||||||| | | ||| | ||| | | Sbjct 373 AACTCGGCAAATTGACTCCGTAACTTCGGGATAAGGAGGGCCTTCTTGCTCCAAAGCAAG 314 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||| ||| |||||||| ||| |||||||| ||||||||||| || Sbjct 313 AAGGCGGCACAGAATAGGGGGTGGCGACTGTTTATTAAAAACACAGGACT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531078600714