Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq3689 77.0 3e-12 >seq3689 Length=887 Score = 77.0 bits (84), Expect = 3e-12 Identities = 65/80 (81%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| |||| ||||| | || | |||| |||| ||| Sbjct 290 GCGACTGTTTATTAAAAACACAGGACTCAGCAAAATGGCAACATCAAGTATTGGGTCTGA 231 Query 128 CGCCTGCCCGGTGCCGGAAG 147 |||||||||||||| || || Sbjct 230 CGCCTGCCCGGTGCTGGCAG 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476691033171