Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1907 298 9e-79 >seq1907 Length=1325 Score = 298 bits (330), Expect = 9e-79 Identities = 222/257 (86%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 329 CTCGTTGATTGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 388 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 |||||||||||||| ||||||||||||| | ||||||||||||||||||||| | ||| Sbjct 389 CTGTTATTGCCTCACACTTCCATTGGCTAGTCGCCAATAGTCCCTCTAAGAAGTCGGCCG 448 Query 123 CCAACCATAGTCGAT-GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | | | | || | | ||| |||||||| | ||||||||||||||| |||||| || Sbjct 449 ACTGGAAGAACCAATCGTGACTAGTTAGCAGGCTGAGGTCTCGTTCGTTACCGGAATCAA 508 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 || ||| || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 509 CCTGAC-AAGCAACCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 567 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 568 AGAGCTCTCAATCTGTC 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796617901071