Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq174 360 3e-97 >seq174 Length=1763 Score = 360 bits (398), Expect = 3e-97 Identities = 257/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | || ||| || ||||||||||||||||||||||||| Sbjct 1325 TACTGAGCCGGATTACTATGGCGGGATCGGCGCAACAGTAGGGTAAAACTAACCTGTCTC 1266 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| | Sbjct 1265 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACGCTTGGAG 1206 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 || ||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1205 TATGCTGCTACTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1146 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1145 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCT 1086 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||| | || || ||||||||||||||||||| |||||| |||||||||| Sbjct 1085 GCAAGTCCCGCAGGTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 1032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854198438496