Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq3689 109 6e-22 >seq3689 Length=887 Score = 109 bits (120), Expect = 6e-22 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 45 GGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNN 104 ||| | || |||||| ||| || | | |||||||||||||| || | | ||||||| Sbjct 7 GGGAACTCCGCATCTGCACGGAGATTTCAATTTCACTGAGCCCATGTTGGAGACAGCGGG 66 Query 105 NNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 164 || |||||| |||||||| ||||||||| |||||||||||||||||||||| Sbjct 67 GCAGTCGTGACGCCATTCATGCAGGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTA 126 Query 165 GGACCGT 171 ||||||| Sbjct 127 GGACCGT 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547074944109