Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq2899 158 3e-36 seq501 152 1e-34 >seq2899 Length=673 Score = 158 bits (174), Expect = 3e-36 Identities = 151/192 (79%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCA---CTTGACCAGT 268 ||||||| ||| ||||| |||| || ||||| ||||||| ||| || ||||||| Sbjct 26 GCTTCGGTGGACAACTTGAGCCTCGTGACATTTTCGGCGC---ATCTGGGCTAGACCAGT 82 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| | Sbjct 83 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCTTTG 142 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | || |||||||||||| ||| | ||| | | ||||||| | |||||||||| Sbjct 143 CCCAGAAACTTCCTTTCCCACTTAGTTGTCTCTTGGAGACCTTAGCGTACGATCTGGGCT 202 Query 389 GTTTCCCTCTCG 400 ||||||||||| Sbjct 203 ATTTCCCTCTCG 214 >seq501 Length=1514 Score = 152 bits (168), Expect = 1e-34 Identities = 126/154 (82%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 245 TCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCC 304 ||||||| | | || ||||||||||||||||||||||||| ||||||||||||||| Sbjct 1512 TCGGCGCAAGAACGCTCCACCAGTGAGCTATTACGCACTCTTTAAAGGATGGCTGCTTCT 1453 Query 305 AAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAG 364 |||| ||||| |||| ||| | ||| ||| |||||| ||||| || | || | || Sbjct 1452 AAGCAAACCTTCTGGCTGTTTCGGCATTCTCACCTCCTTTTCCACTTAGCGATCATTCAG 1393 Query 365 GGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||||||||||| ||||||||||||||||||||| Sbjct 1392 GGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCT 1359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177322192384