Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08-
05] 23,591 sequences; 11,754,406 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq1716 163 5e-38
seq2853 73.4 7e-11
seq2765 73.4 7e-11
>seq1716
Length=1290
Score = 163 bits (180), Expect = 5e-38
Identities = 197/264 (75%), Gaps = 3/264 (1%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| |||| |||| | | | |||||| ||||||||| |||||||| ||
Sbjct 263 GCTTTCGTCTGTCAGTGTCAATATCGGCCCAGCAGGGTGCCTTCGCCTTTGGTGTTCTTC 204
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTC-AA 124
| ||||||| ||||||||||||||||| |||||||| |||| || | | | || ||
Sbjct 203 CCGATATCTATGCATTTCACCGCTACACCGGGAATTCCCCCTGCCCCTACCGTATTCTAA 144
Query 125 GAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
| ||||||| | ||| | ||||||||||| | ||||||| ||||| |
Sbjct 143 GCCTGCCAGTTTCCACCGCATTTTCAGGGTTGAGCCCTGATCTTTCACAGTAGACTTAGC 84
Query 185 TTCCCGCCTACACG-CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTAT 243
|| ||| || | |||||||| |||||| | |||||||||||||||| ||| |||||
Sbjct 83 AAACCACCT-CAGGACCCTTTACGCCCAATGATTCCGGATAACGCTTGCATCCTCCGTAT 25
Query 244 TACCGCGGCTGCTGGCACGTAGTT 267
||||||||||||||||||| ||||
Sbjct 24 TACCGCGGCTGCTGGCACGGAGTT 1
>seq2853
Length=425
Score = 73.4 bits (80), Expect = 7e-11
Identities = 78/103 (76%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| ||||||||||||||| |||| | |||||||| || |
Sbjct 287 CCCACGCTTTCGCACCTCAGCGTCAGTTAAGCCCCAGGGAGATGCCTTCGCATTCGGCCT 346
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103
|||||| ||||||| |||||||| |||| | ||||||||
Sbjct 347 TCCTCCTGGTATCTACAGATTTCACCCCTACTCCAGGAATTCC 389
>seq2765
Length=227
Score = 73.4 bits (80), Expect = 7e-11
Identities = 52/60 (87%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 190 GCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGC 249
||||||| ||||||||| |||| ||| |||| |||||||||||| || |||||||||||
Sbjct 60 GCCTACATGCCCTTTACGCCCAGTAATTCCGAATAACGCTTGCCCCCCCCGTATTACCGC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828610587861
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |