Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1907 331 2e-88 >seq1907 Length=1325 Score = 331 bits (366), Expect = 2e-88 Identities = 263/311 (85%), Gaps = 5/311 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCG-CCGGCTTCTTA 78 || |||||||| | |||||||| ||| || | | || | |||| ||| ||||||| Sbjct 494 GAACGAGACCTCAGCCTGCTAACTAGTCACGATTGGTTCTTCCAGTCGGCCGACTTCTTA 435 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||||| ||| | |||| |||||||| |||||||||||||||||||||||||||| Sbjct 434 GAGGGACTATTGGCGACTAGCCAATGGAAGTGTGAGGCAATAACAGGTCTGTGATGCCCT 375 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||||||||||||||||||||| | ||||||| | | ||||||| Sbjct 374 TAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCAATCAACGAG--CCTAGCCTTGGC 317 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 || ||||| |||||||||| | ||||| ||||| |||||||||| ||||||||||| Sbjct 316 CGACAGGTCCGGGTAATCTT-TGAAACTGCATCGTGATGGGGATAGATGATTGCAATTAT 258 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 | ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 257 TCATCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCC 198 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 197 TGCCCTTTGTA 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946976546048