Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3689 149 2e-33 seq2758 107 7e-21 >seq3689 Length=887 Score = 149 bits (164), Expect = 2e-33 Identities = 114/135 (84%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 349 CAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | ||| || | |||||||| ||| |||||| ||||||||| |||||||| Sbjct 34 CAATTTCACTGAGCCCATGTTGGAGACAGCGGGGCAGTCGTGACGCCATTCATGCAGGTC 93 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 ||||||||| ||||||||||||||||||||||||| || | |||||| ||||||||| Sbjct 94 AGAACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTT 153 Query 469 ACTGGGGCTTCAATT 483 ||||| ||||| || Sbjct 154 ACTGGACCTTCAGTT 168 >seq2758 Length=1065 Score = 107 bits (118), Expect = 7e-21 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| |||| |||||||||||||||| ||| |||||||| | |||||| || Sbjct 156 TCGACTTGTAGGTCTTGCAGTCAAGCTCCCTTATGCCTTTACACTCTACGGCTGATTTCC 97 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGG 104 |||| ||||||||||||||| | |||||||||| |||| || Sbjct 96 GTCCAGCCTGAGGGAACCTTTGCACACCTCCGTTACCTTTTAGG 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701998386816