Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coccomyxa_20sp._20SUA001_20[genbank_20GCA_5F001244535.1_202015-08- 05] 23,591 sequences; 11,754,406 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq174 77.0 5e-12 >seq174 Length=1763 Score = 77.0 bits (84), Expect = 5e-12 Identities = 101/135 (75%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| | Sbjct 1323 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGAT 1379 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | ||||||||||||||| ||| |||||| | Sbjct 1380 GGCGCAAAGCTACCATCCGTCGGCTAACACCTGAACGCCTCTAAGGTGGAAGCCATGCTA 1439 Query 121 -GAACGGGGTGATTC 134 || |||||| |||| Sbjct 1440 GGAGCGGGGTCATTC 1454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819012781824