Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq8357 257 7e-66 >seq8357 Length=9252 Score = 257 bits (284), Expect = 7e-66 Identities = 242/304 (80%), Gaps = 6/304 (2%) Strand=Plus/Plus Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||| || | || || || ||||||||| |||||||||||||||||||||||| Sbjct 5596 GATGCTGGCAAAAGGCTTTCAACCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACAT 5655 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAA 500 ||||||||| |||||| |||||| || |||||| |||| ||| || ||||| Sbjct 5656 GTATGCGAGTTGGTGGGTGGAAAACCCATGAAGCGTAAGGAAACTGACTGG---TGGGAT 5712 Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || | ||||||||||||||| | || | ||| | | || ||||||| ||||| Sbjct 5713 GGCCTGTGCCTGCACCATCGACCGACCATGCGTTTCTGCAAAAGG-TTTGAGTGCGAGCA 5771 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 5772 TACCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGTGAAGCCAGGTGAAAA 5831 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||||||||||| || || ||| ||||||||||| | || | |||||||||||| Sbjct 5832 CCTGGTGGAGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGG 5891 Query 680 GCGA 683 |||| Sbjct 5892 GCGA 5895 Score = 185 bits (204), Expect = 4e-44 Identities = 143/170 (84%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | |||||| |||| ||||||||||||| | || | || ||||||| | ||||| | Sbjct 5253 TTCAAAGAGTCGGGTTGCTTGGGAATGCAGCCCAAATTTGGTGGTAAATCCCATCTAAGG 5312 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 5313 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 5372 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 ||| |||||||||||||||| | |||||||||||| |||||||| ||| Sbjct 5373 TTGAAAAGAGAGTTAAAAAGTGCTTGAAATTGTTGAGGGGGAAGCGTTTG 5422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079651973750