Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq13206 399 6e-109 seq24 356 6e-96 seq3385 212 2e-52 seq14742 201 3e-49 >seq13206 Length=631 Score = 399 bits (442), Expect = 6e-109 Identities = 334/408 (82%), Gaps = 1/408 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 426 TACCTACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 367 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||| ||| ||| || | ||||| | | ||| Sbjct 366 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGCTTGGTAAGCCGGTTGT 307 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| ||||||||| |||||||||| |||| | ||||| | |||||||| ||| Sbjct 306 GAAAGCCCCGGGCTCAACCTGGGAACGGCATCCGGAACTGCCAGGCTAGAGTGCAGGAGA 247 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || ||| ||||||| ||||||| |||||||||||||| || ||||||| |||| ||| Sbjct 246 GGAAGGTAGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAGGAATACCAGTGG 187 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||| ||| ||||| | ||||||||||| | | |||||||||||| ||||||||| Sbjct 186 CGAAGGCGGCCTCCTGGACTGACACTGACGCTGAGGTGCGAAAGCGTGGGTAGCAAACAG 127 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTAC 361 ||||||||||||| |||||||||||| |||||||| || ||||| |||||| | | Sbjct 126 GATTAGATACCCTAGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGGAGCCTCGA 67 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||| || || || |||||| |||| ||||||||||||| ||| Sbjct 66 GTTCTTAGTGGCGCAGTTAACGCAATAAGTCGACCGCCTGGGGAGTAC 19 >seq24 Length=14409 Score = 356 bits (394), Expect = 6e-96 Identities = 321/401 (80%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 3413 AGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTT 3472 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||| || |||||| || |||| | || ||||||||| Sbjct 3473 GTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGACGTTTAAGTCGGGGGTGAAATCC 3532 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||||| |||| |||| ||| || | |||| ||| || |||| | ||||| | || Sbjct 3533 CAGGGCTCAACCCTGGAACTGCCTTCGATACTGGACGTCTTGAGTTCGAGAGAGGTGAGT 3592 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| ||||||||| ||| |||||||| |||||||||| Sbjct 3593 GGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGC 3652 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | |||| | ||||||||| | | ||||||||||||||||||||||||||||| Sbjct 3653 GGCTCACTGGCTCGAAACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 3712 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG-GGATTTACTTCCTTG 368 ||||||||||||||||||| |||||||| |||| ||||| || ||||| || | Sbjct 3713 TACCCTGGTAGTCCACGCCGTAAACGATGGATGCTAGCCGTTGGCGGGTTTAC-TCGTCA 3771 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||||||||| | ||| ||||||||||| ||| Sbjct 3772 GTGGCGCAGCTAACGCATTAAGCATCCCGCCTGGGGAGTAC 3812 >seq3385 Length=505 Score = 212 bits (234), Expect = 2e-52 Identities = 180/222 (81%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 229 TACCTGGAGAATAAGCTCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGAGC 170 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||| ||||||||||||||||||||||| || |||||| | | |||| |||| || Sbjct 169 TAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTTTAAGTCAGGGGT 110 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||| ||||| |||| |||| ||| ||| |||| ||||| | | ||| Sbjct 109 GAAATCCCGGGGCTCAACCCCGGAACTGCCCTTGAAACTGGGAAGCTAGAATCTTGGAGA 50 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATAT 224 || | |||||||||| |||||| ||||||| ||||||||| Sbjct 49 GGCGAGTGGAATTCCGAGTGTAGAGGTGAAATTCGTAGATAT 8 >seq14742 Length=52551 Score = 201 bits (222), Expect = 3e-49 Identities = 247/336 (74%), Gaps = 1/336 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||| | | ||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 3524 TACTTAAGGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGGGGGTGC 3465 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||||| | |||||||||||| | | ||| |||| ||| || ||| Sbjct 3464 AAGCGTTGTCCGGAATGATTGGGCGTAAAGCATCTGTAGGTGGTTTCTAAAGTCAACTGT 3405 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGACTAGAGTGTGTCAG 181 ||||||| | ||| ||| | ||| || ||| | ||| ||| |||| || || Sbjct 3404 CAAATCCCAGAGCTCAACTTTGGACAGGCGGTTGAGTACTTAGGAACTTGAGTATGGTAG 3345 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | |||||||| ||| ||| ||||||||| ||| || ||| |||||||| || Sbjct 3344 GGGTAGAGGGAATTCCTAGTGGAGCGGTGAAATGCACAGAGATTAGGAAGAACACCAGTG 3285 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||| || | ||||| | |||||| || | | ||||| ||||||| || | Sbjct 3284 GCGAAAGCGCTCTACTGGGCCATGACTGACACTGAGAGATGAAAGTTAGGGGAGCGAAAA 3225 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| ||||||| || |||||||| Sbjct 3224 GGATTAGATACCCTTGTAGTCCTAACCGTAAACGAT 3189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289390762400