Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq5444 107 2e-21 seq24 87.8 2e-15 >seq5444 Length=4073 Score = 107 bits (118), Expect = 2e-21 Identities = 128/169 (76%), Gaps = 5/169 (3%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| |||| ||| || ||||| ||| || ||| ||| | | | |||| Sbjct 3703 AAACCGACACAGGTAGGTTGGTAGAGAATACTGAGGGGCGCGAGAGAA-CTCTCTCTAAG 3645 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG-TCCCTACCCAGAAATGGGA- 141 ||||| ||||||||| ||| |||||||||||| || ||| |||| | ||| ||| Sbjct 3644 GAACTCGGCAAACTGGCCCCGTAACTTCGGGAGAAGGGGCGCCCTTTCTGTAAAAAGGAA 3585 Query 142 -GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| |||| ||| | |||||||||||| |||||||||||| || Sbjct 3584 GGGCCGCAGGGAATCGGTTCTGGCAACTGTTTATCAAAAACACAGGTCT 3536 >seq24 Length=14409 Score = 87.8 bits (96), Expect = 2e-15 Identities = 129/182 (71%), Gaps = 13/182 (7%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || ||||| |||||| ||||| ||| | | |||| Sbjct 7177 AAACCGACACAGGTGGACTGGTAGAGTATACCAAGGCGTTTGAGCGAACTGTGCTGAAGG 7236 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCT----------ACCCAGA 134 |||| |||||| || | | |||||||||||| || | | || | | || | Sbjct 7237 AACTCGGCAAATTGCCTCCGTAACTTCGGGAGAAGGAGGCCTTCGGTTCGGGCAACCGG- 7295 Query 135 AATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCC 194 || |||||| ||| ||| ||| ||| |||||||| ||||||||||||||| ||| Sbjct 7296 -ATCGGAGGG-GCACAGACCAGGGGGTGGCGACTGTTTAGCAAAAACACAGGGCTCTGCG 7353 Query 195 AA 196 || Sbjct 7354 AA 7355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531116506150