Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq24 105 6e-21 seq5444 73.4 4e-11 >seq24 Length=14409 Score = 105 bits (116), Expect = 6e-21 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | ||||||||||| |||||||||| |||||| || || ||| ||||| Sbjct 7311 ACCAGGGGGTGGCGACTGTTTAGCAAAAACACAGGGCTCTGCGAAGCCGCAAGGCGACGT 7370 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||| |||||||||||||||||||||||||||| Sbjct 7371 ATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 7406 >seq5444 Length=4073 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || ||||||||| |||||||||| ||| ||||| || ||| | ||| ||| ||| Sbjct 3562 GCAACTGTTTATCAAAAACACAGGTCTCCGCAAAGTCGTAAGACAATATATGGGGGCTGA 3503 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||| |||||||||||| || Sbjct 3502 CGCCTGCCCAGTGCCGGAAGGTCAA 3478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476725056725