Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq5444 293 5e-77 seq24 291 2e-76 seq6395 105 1e-20 >seq5444 Length=4073 Score = 293 bits (324), Expect = 5e-77 Identities = 286/366 (78%), Gaps = 8/366 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | |||||||||||||| | ||||||| | | ||| || Sbjct 3295 GCATCTTCACGGACAAGTCTATTTCACCGAGTCTCTCTCCGAGACAGCGTTCTGATCATT 3354 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||| || | Sbjct 3355 ACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAGGACTGTCA 3414 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGCTCTAACAGATC 185 ||||||| ||||||||| || ||||||| || | |||||| | ||||||| | Sbjct 3415 TAGTTACAGCCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTCGAAAAACTCTAACCAACT 3474 Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 |||| ||||||| |||| |||||||||||||| || ||| || ||||| |||||| || Sbjct 3475 TCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATATTGTCTTACGACTTTGCG 3534 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------TGTCA 299 || ||||||||||||| |||||||| || | || |||| |||||||| | | | Sbjct 3535 GAGACCTGTGTTTTTGATAAACAGTTGCCAGAACCGATTCCCTGCGGCCCTTCCTTTTTA 3594 Query 300 TAGACA-GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 ||| | ||| ||||||||||| ||||||||||| || |||||||||||||||| | | Sbjct 3595 CAGAAAGGGCGCCCCTTCTCCCGAAGTTACGGGGCCAGTTTGCCGAGTTCCTTAGAGAGA 3654 Query 359 GTTCTC 364 |||||| Sbjct 3655 GTTCTC 3660 >seq24 Length=14409 Score = 291 bits (322), Expect = 2e-76 Identities = 290/373 (78%), Gaps = 22/373 (6%) Strand=Plus/Minus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| ||| || | | ||||||| | || Sbjct 7584 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGCCTGTGCTGGAGACAGCGGGGAAG 7525 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 7524 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 7465 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||||||||||||||||||||||| ||||||| | ||| || |||| || Sbjct 7464 CGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCGGAGC-----TTGC----ACC 7414 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| ||||||||||| |||||||||||||||||| ||||||| ||| |||||| ||| Sbjct 7413 CCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGCCTTGCGGCTT 7354 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG--CGGCCTGTC- 298 ||||| |||||||||||| ||||||||||| ||| ||| || | || || Sbjct 7353 CGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCCACCCCCTGGTCTGTGCCCCTCCGATCC 7294 Query 299 -ATAGAC--------AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 | | | |||| | ||||||||| ||||||||| | || ||||||||||||| Sbjct 7293 GGTTGCCCGAACCGAAGGC-CTCCTTCTCCCGAAGTTACGGAGGCAATTTGCCGAGTTCC 7235 Query 350 TTAACAATAGTTC 362 || | | ||||| Sbjct 7234 TTCAGCACAGTTC 7222 >seq6395 Length=39126 Score = 105 bits (116), Expect = 1e-20 Identities = 212/315 (67%), Gaps = 31/315 (10%) Strand=Plus/Plus Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||| ||||||||| | ||| |||||||||||||||||||||||| ||| ||| Sbjct 11120 ACGCCATTCATGCGGGTCGACAATTATTCGACAAGGAATTTCGCTACCTTAGAACCCTTA 11179 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAG--TTCAC----------------TGCTTC 168 ||||| ||| |||||||||||| ||| || |||| |||| | Sbjct 11180 GAGTTAGGGCTGCCGTTTACTGGTCCTTCAGACATCACGCGTTTTTTTTTTATTTGCTGC 11239 Query 169 GATTGC----TCTAACAGATCCCCTTA-------ACCTTCCAGCACCGGGCAGGCGTCAG 217 |||| ||| | || | | | | || ||||||||||||||||||||| Sbjct 11240 TTTTGCCGCAAATAAAAAATAACATGACGTTCATATCTCCCAGCACCGGGCAGGCGTCAG 11299 Query 218 CTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGG 277 ||||| | || || | |||| ||| | |||||||||||| |||||||| | Sbjct 11300 ACTTTATACGTTGTGTTTCCACTTGGCAAAGTCCTGTGTTTTTGTTAAACAGTTCCCCTC 11359 Query 278 GCCTATTCTCTGCGGCCTGTCATAGAC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCAT 336 || ||| | || ||| ||| || ||| ||||| || ||| |||| || Sbjct 11360 CCCAATTTTGTGACCCCT-AGATATACTAGGGCTTGCTTCTACCGAAGATACGCAAGTAT 11418 Query 337 TTTGCCGAGTTCCTT 351 ||||||||||||||| Sbjct 11419 TTTGCCGAGTTCCTT 11433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062227625600