Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8357 396 5e-108 seq967 212 1e-52 seq2011 206 5e-51 >seq8357 Length=9252 Score = 396 bits (438), Expect = 5e-108 Identities = 267/295 (91%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTC-ATCAGTAGGGTAAAACTAACCTGTCT 58 |||| ||| ||||||| || || | || | ||| | |||||||||||||||||||||||| Sbjct 8406 TACTGAGCCGAATTACTAT-GGCGAGATCAGTCCAACAGTAGGGTAAAACTAACCTGTCT 8348 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8347 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGT 8288 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8287 GAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 8228 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 8227 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 8168 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 8167 TTCAAATCCCGAAAGGCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 8113 >seq967 Length=2111 Score = 212 bits (234), Expect = 1e-52 Identities = 128/135 (95%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 |||||||||||||||| ||||||||||||||||||||||| |||||||||||| || Sbjct 259 AGCTCACGTTCCCTATCAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAAT 318 Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 319 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 378 Query 196 ACAAGCCAGTTATCC 210 ||||||||||||||| Sbjct 379 ACAAGCCAGTTATCC 393 >seq2011 Length=3986 Score = 206 bits (228), Expect = 5e-51 Identities = 143/162 (88%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATG 136 |||||||||||| |||||||||||||||||||| ||||| ||| |||||||| ||| Sbjct 806 GCTCACGTTCCCAATTAGTGGGTGAACAATCCAGCGCTTGGTGAACTCTGCTTCATAATG 865 Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 | |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 866 ACAGGAAGAGCCAACAGCGAGGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 925 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||| ||||||| | |||||||| |||||||||| Sbjct 926 CAAGCCAGTTGCCCCTGTGCTGACTTTTCTAACACCTCTAGC 967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854261373600