Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq24 134 2e-29 seq5444 82.4 8e-14 >seq24 Length=14409 Score = 134 bits (148), Expect = 2e-29 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||| || | | |||||||||| | | | ||||||||||| Sbjct 7610 CGGGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 7551 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 7550 AGCCTGTGCTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 7491 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 7490 GACAAGGAATTTCGCTACCTTAGGACCGTTA 7460 >seq5444 Length=4073 Score = 82.4 bits (90), Expect = 8e-14 Identities = 93/126 (74%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 47 GTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNN 105 ||| || |||||||||| || | | ||||||| ||| || | | ||||||| Sbjct 3288 GTAGTCCGCATCTTCACGGACAAGTCTATTTCACCGAG-TCTCTCTCCGAGACAGCGTTC 3346 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 ||| || ||||||||||||| ||||||| |||||| ||||||||||||||||| Sbjct 3347 TGATCATTACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAG 3406 Query 166 GACCGT 171 ||| || Sbjct 3407 GACTGT 3412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547113991275