Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq9206 95.1 2e-17 seq1031 95.1 2e-17 seq10027 84.2 3e-14 >seq9206 Length=9342 Score = 95.1 bits (104), Expect = 2e-17 Identities = 127/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 70 GCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGG 129 || |||||| ||||||||||| || || ||||||||||| ||||| ||||| || ||| Sbjct 8315 GCCTCTTCCCAGACCTTCTGGTGGCGCCGCTGCAGCGAGCAGTCGCGCTCGCCGAGATGG 8256 Query 130 ATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGG 189 | |||| ||||| ||||||| || | || | || | ||| || || ||| ||| Sbjct 8255 ACCGCGTTGCCCTTGCCGTCGCCGAGGATCTGGATCTCGATGTGGCGCGGCTTGCCGAGG 8196 Query 190 TACTTTTCCAGGTAGACC--ATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAGCG 242 ||||| || | ||||||| ||| || |||||| | || ||| |||| ||| Sbjct 8195 TACTTCTCGATGTAGACCGAATC--GTCGCCGAAGGCGTTGCGCGCCTCGGTGCG 8143 >seq1031 Length=548 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 |||||||| || || ||||||||||| || |||||||||||||| ||||| ||||| || Sbjct 432 GGCGCTTCCTCGAGCACCTTCTGGTGGCGGCGTTGCAGCGAGCAGTCGCGCTCGCCGAGA 491 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTG 183 ||||| |||| ||| | ||||||| | || || | || | ||| || |||||| Sbjct 492 TGGATCGCGTTGCCGTTGCCGTCGCCGAACACCTGGAACTCGATGTGGCGCGGGTTG 548 >seq10027 Length=512 Score = 84.2 bits (92), Expect = 3e-14 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 49 TCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAG 108 ||||||| ||||| ||||| ||||| || | ||||||||||| || || ||||| | Sbjct 345 TCGTCCATTCCCGGCGCCGGGGCTTCCTCGATGACCTTCTGGTGCCGGCGCTGCAGGCTG 404 Query 109 CAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCC 168 || ||||| ||| |||||||| | ||| ||| || | |||| | || ||||| || Sbjct 405 CAGTCGCGCTCGAACAGGTGGACGACGTTGCCGTGCCGGTCGCCGAACACCTGCACCTCG 464 Query 169 ACGTGACGTGGGTTGGTCAGGTACTTTTC 197 | || || ||| ||| | |||||| || Sbjct 465 ATATGGCGCGGGCGGGTGACGTACTTCTC 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735884315750