Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq5813 105 2e-20 seq11410 95.1 3e-17 >seq5813 Length=9432 Score = 105 bits (116), Expect = 2e-20 Identities = 267/402 (66%), Gaps = 18/402 (4%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||| ||||| | ||||||||| |||| ||||||||| || || || | || || | Sbjct 5543 CGATCGTCAGGAGCTCGCCGCCGACCTCGGTCCACGCGAGACCGGTCGCGACGCCCACCT 5602 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | |||| ||||||| |||||||| ||| |||||||||| || ||| | | Sbjct 5603 GGTCCTCGCCCTCGGCCTCGCCGTAGCGGAACCGCGGCACGCCGAGATAGGTCTCGACGT 5662 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCAT-----GTTCCTTGACCGC 175 ||||| || || | ||||||| || ||| || | | | ||||||| | | Sbjct 5663 TGTCGGACGAGATCGTCACCGAC-----TTCTTCTCGCTCGTCAGCAGCTCCTTGATCAC 5717 Query 176 CTT--GCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTG 233 ||| ||| ||| | |||| | | ||||| |||| ||||| ||||| ||||||||| Sbjct 5718 CTTCCGCGCCAG--CGTCGCCGTTTCGCGCTTCAGGTTGCGCACGCCGGCCTCGCGGGTG 5775 Query 234 TAGTAGCGGACGATGTCGCGGATCGTGCCGA--CTTCAAATTCGATCTCGCCCTTCTTCA 291 ||| ||||| || ||||||| ||||| | || | | ||| || || Sbjct 5776 TAGCGGCGGATGAGCGTGCGGATC--GCCGAATCGTCGACGGTAAGCTCCCCGGCGCGCA 5833 Query 292 GGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGT 351 |||| | | || | || ||| ||||| | | ||||| | || |||||||| Sbjct 5834 GGCCGTGGTCCTTCGCCGCCTCCGGCAGGAGGTGGGTCTTCGCGATCTCGACCTTCTCGT 5893 Query 352 CTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCA 393 | |||||||| || | | ||| || | ||||||||||||| Sbjct 5894 CCTCGGTGTAGCCGGCGATGCGGATGATCTCCATCCGGTCCA 5935 >seq11410 Length=532 Score = 95.1 bits (104), Expect = 3e-17 Identities = 161/230 (70%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 170 GACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCG 229 ||||||||||||| | || | | | ||||||||| ||||| || |||||||| Sbjct 141 GACCGCCTTGCGGGCCAGGTTGCCCAGTTCGCGCTCCAGCGACCGCACGCCCGCTTCGCG 200 Query 230 GGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTC--AAATTCGATCTCGCCCTTC 287 |||||||||||||| | ||||| || ||| || | || |||| ||| | | Sbjct 201 GGTGTAGTAGCGGATCAGATCGCGAAT--GGCCTTCTCCGGAACCTCGAAGTCGGCGTCG 258 Query 288 TTCAGGCCATTGGCCGAAATCTGCTTGG---GCGCGAGGTACTTGATGGCGATGTTGATC 344 ||||||||| | || ||| |||||| || || || || ||||||| | || | Sbjct 259 CTCAGGCCATGGTCCTTGATCAGCTTGGGCAGCACGTGGCGCT---TGGCGATCTCGACC 315 Query 345 TTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 ||||| || |||||||| || || | ||| || | ||||| |||||||| Sbjct 316 TTCTCATCCTCGGTGTAGCCGGGGATGCGGATGATCTCCATGCGGTCCAG 365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158212049600