Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq24 145 6e-33 seq14742 116 3e-24 >seq24 Length=14409 Score = 145 bits (160), Expect = 6e-33 Identities = 132/163 (81%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACA-CTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| | ||||||| ||| || || |||| |||||||||||| || |||| Sbjct 4242 TCGAGTTGCAGAGTGCAATCCGAACT--GAGACGGCTTTTTGGGATTAGCTCACCTTCGC 4185 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 || | || |||| ||| |||||||| ||||||| ||||| ||| |||||||| Sbjct 4184 AGGCTCGCTGCCCATTGTCACCGCCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCC 4125 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 ||||||||||||||||||||||||||||||| ||| || |||| Sbjct 4124 ATGAGGACTTGACGTCATCCCCACCTTCCTCGCGGCTTATCAC 4082 >seq14742 Length=52551 Score = 116 bits (128), Expect = 3e-24 Identities = 121/156 (78%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||| |||||||||| ||| | | || | ||| |||||| ||| ||||||||| Sbjct 2676 CGAGTTGCAGCCTACAATCCGAACTGAGGCTA-AGTTTGGGGGATTTGCTTCCCCTCGCG 2734 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || || ||| | ||||||||| ||||||| ||||| |||||| || Sbjct 2735 GGTTCGCTTCCTGTTGTCTTAGCCATTGTATTACGTGTGTAGCCCAGGATGTAAGGGGCA 2794 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 || ||||||||||||||| | ||||||||||| || Sbjct 2795 TGCTGACTTGACGTCATCCTCTCCTTCCTCCGGCTT 2830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415934613250