Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq24 242 6e-62 seq13206 235 9e-60 seq3385 176 7e-42 seq14742 134 2e-29 >seq24 Length=14409 Score = 242 bits (268), Expect = 6e-62 Identities = 223/282 (79%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||||||||||| | |||| | ||||||||||||||||||| Sbjct 3695 CCCACGCTTTCGCACCTCAGCGTCAGTTTCGAGCCAGTGAGCCGCCTTCGCCACTGGTGT 3636 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || |||| ||||||||| |||||||| |||||| ||||||||| | |||||| | || Sbjct 3635 TCTTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCTCGAAC 3576 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 |||||| |||| || || |||| ||||||||||| | |||||| | |||| Sbjct 3575 TCAAGACGTCCAGTATCGAAGGCAGTTCCAGGGTTGAGCCCTGGGATTTCACCCCCGACT 3516 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | |||||||| || |||||| |||| ||| |||| | |||||| ||| ||| || Sbjct 3515 TAAACGTCCGCCTACGTGCGCTTTACGCCCAGTAATTCCGAACAACGCTAGCCCCCTTCG 3456 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 3455 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTC 3414 >seq13206 Length=631 Score = 235 bits (260), Expect = 9e-60 Identities = 226/290 (78%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||||| | ||||||||||||||||| | Sbjct 137 CCCACGCTTTCGCACCTCAGCGTCAGTGTCAGTCCAGGAGGCCGCCTTCGCCACTGGTAT 196 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||||||||||| ||||||| | ||||||| |||| Sbjct 197 TCCTCCCGATCTCTACGCATTTCACCGCTACACCGGGAATTCTACCTTCCTCTCCTGCAC 256 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || ||||| | |||| | |||||||||| | ||||||| | | || Sbjct 257 TCTAGCCTGGCAGTTCCGGATGCCGTTCCCAGGTTGAGCCCGGGGCTTTCACAACCGGCT 316 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | || || ||||| ||| |||||| |||| ||| |||| |||||||||| ||| || Sbjct 317 TACCAAGCCACCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCG 376 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||| ||||||||| |||| ||| ||||| Sbjct 377 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGTAGGTA 426 >seq3385 Length=505 Score = 176 bits (194), Expect = 7e-42 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64 TCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCA 123 |||| ||||||||| |||||||| |||||| ||||||||| | ||||||||| | || Sbjct 3 TCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCGCCTCTCCAAGATTCT 62 Query 124 AGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGC 183 || ||||||||| |||| ||||||||||| | |||||| ||||||| Sbjct 63 AGCTTCCCAGTTTCAAGGGCAGTTCCGGGGTTGAGCCCCGGGATTTCACCCCTGACTTAA 122 Query 184 CTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTAT 243 |||||||| || |||||| |||| ||| |||| | |||||| || ||| ||||| Sbjct 123 AAAGCCGCCTACGTGCGCTTTACGCCCAGTAATTCCGAACAACGCTAGCTCCCTCCGTAT 182 Query 244 TACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 183 TACCGCGGCTGCTGGCACGGAGTTAGCCGGAGCTTATTCTCCAGGTA 229 >seq14742 Length=52551 Score = 134 bits (148), Expect = 2e-29 Identities = 196/276 (71%), Gaps = 1/276 (0%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 ||||| |||||| | | |||| | ||| |||||||||||||||| ||| || ||| Sbjct 3249 CTCAGTGTCAGTCATGGCCCAGTAGAGCGCTTTCGCCACTGGTGTTCTTCCTAATCTCTG 3308 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 ||||||||||||| ||| |||||||| | || || | ||||||| ||| Sbjct 3309 TGCATTTCACCGCTCCACTAGGAATTCCCTCTACCCCTACCATACTCAAGTTCCTAAGTA 3368 Query 136 -TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194 |||| || | ||||||| | | ||| ||| |||||| || |||| Sbjct 3369 CTCAACCGCCTGTCCAAAGTTGAGCTCTGGGATTTGACAGTTGACTTTAGAAACCACCTA 3428 Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254 || |||||| |||||| | |||||| ||||||||| || ||||||||||||||| Sbjct 3429 CAGATGCTTTACGCCCAATCATTCCGGACAACGCTTGCACCCCCTGTATTACCGCGGCTG 3488 Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||| ||||||||| |||||||||| | ||| Sbjct 3489 CTGGCACAGAGTTAGCCGGTGCTTATTCCTTAAGTA 3524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828669729475