Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq24 407 4e-111 seq13206 389 9e-106 seq14742 255 1e-65 seq3385 230 6e-58 >seq24 Length=14409 Score = 407 bits (450), Expect = 4e-111 Identities = 332/402 (83%), Gaps = 6/402 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 3414 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 3473 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||||||||||||||| | |||||| || ||||||| | ||||||| | Sbjct 3474 TTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGACGTTTAAGTCGGGGGTGAAATCCC 3533 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 | |||||||||| || ||||| || || |||| | | || |||| | ||| || |||| Sbjct 3534 AGGGCTCAACCCTGGAACTGCCTTCGATACTGGACGTCTTGAGTTCGAGAGAGGTGAGTG 3593 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| ||||||| |||||||| |||||||||| ||| |||||||||||||||||||| Sbjct 3594 GAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGCG 3653 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 ||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 3654 GCTCACTGGCTCGAAACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGAT 3713 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTC-- 366 |||||||||||||||||||||||||||| || |||| || || | | || ||| Sbjct 3714 ACCCTGGTAGTCCACGCCGTAAACGATGGATGCTAGCCGTTGGCGGGTTTA----CTCGT 3769 Query 367 CGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| |||||| |||||| |||| || || ||||||||||| Sbjct 3770 CAGTGGCGCAGCTAACGCATTAAGCATCCCGCCTGGGGAGTA 3811 >seq13206 Length=631 Score = 389 bits (430), Expect = 9e-106 Identities = 327/400 (82%), Gaps = 1/400 (0%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || ||||| |||||||||| |||||||||||||||||||||||| |||| || ||||||| Sbjct 418 GAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA 359 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 |||||||||||||||||||| | |||||||||| || |||| | | ||||||| | Sbjct 358 ATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGCTTGGTAAGCCGGTTGTGAAAGCCC 299 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 ||||||||| || || || | | |||||| |||||||||||||||| || | || Sbjct 298 CGGGCTCAACCTGGGAACGGCATCCGGAACTGCCAGGCTAGAGTGCAGGAGAGGAAGGTA 239 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||| Sbjct 238 GAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAGGAATACCAGTGGCGAAGGCG 179 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 || | |||||||| |||||| |||||| |||||||||||| ||||||||||||||||| Sbjct 178 GCCTCCTGGACTGACACTGACGCTGAGGTGCGAAAGCGTGGGTAGCAAACAGGATTAGAT 119 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 ||||| |||||||||||||||||||||| ||||| || ||| | ||| || Sbjct 118 ACCCTAGTAGTCCACGCCGTAAACGATGTCGACTAGCCGTTGGGAGCCTCGAGTTCT-TA 60 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| ||||| |||||||||||| || ||||||||||| Sbjct 59 GTGGCGCAGTTAACGCAATAAGTCGACCGCCTGGGGAGTA 20 >seq14742 Length=52551 Score = 255 bits (282), Expect = 1e-65 Identities = 303/409 (74%), Gaps = 10/409 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||| |||| |||| |||||||||| |||||||||||||||||||||| ||| || Sbjct 3524 TACTTAAGGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGGGGGTGC 3465 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||| | ||||||||||| | ||||||||||||| |||||| || Sbjct 3464 AAGCGTTGTCCGGAATGATTGGGCGTAAAGCATCTGTAGGTGGTTTCTAAAGTCAACTGT 3405 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAA-ACTGCAGGGCTAGAGTGCAGGAG 179 ||| | | ||||||| || || |||| ||| | || |||| | || Sbjct 3404 CAAATCCCAGAGCTCAACTTTGGACAGGCGGTTGAGTACTTAGGAACTTGAGTATGGTAG 3345 Query 180 GGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTG 239 ||| | ||||||||||||| ||||||||||||| ||| ||||||| ||||||||||| Sbjct 3344 GGGTAGAGGGAATTCCTAGTGGAGCGGTGAAATGCACAGAGATTAGGAAGAACACCAGTG 3285 Query 240 GCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACA 299 ||||| ||| | |||| | | |||||||||||| ||||| ||||||| || | Sbjct 3284 GCGAAAGCGCTCTACTGGGCCATGACTGACACTGAGAGATGAAAGTTAGGGGAGCGAAAA 3225 Query 300 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATA 359 |||||||||||||| ||||||| |||||||||||| |||||| || | || | Sbjct 3224 GGATTAGATACCCTTGTAGTCCTAACCGTAAACGATGGATACTAAATGCTG----TCAAA 3169 Query 360 AGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| | ||| ||||| ||||||| || ||||||||||| Sbjct 3168 A-----ACAGTGTTGAAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 3125 >seq3385 Length=505 Score = 230 bits (254), Expect = 6e-58 Identities = 180/215 (84%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| ||||||||| | || Sbjct 217 AAGCTCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGAGCTAGCGTTGTTCG 158 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| | |||||| || || ||||||||| ||||||| | || Sbjct 157 GAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTTTTAAGTCAGGGGTGAAATCCCGGGG 98 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||||||| ||||| ||||||||| |||||| | |||| ||| |||||||| Sbjct 97 CTCAACCCCGGAACTGCCCTTGAAACTGGGAAGCTAGAATCTTGGAGAGGCGAGTGGAAT 38 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGA 227 ||| ||||||| |||||||| |||||||||| ||| Sbjct 37 TCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203004780800