Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq8357 511 2e-142 seq6186 86.0 2e-14 >seq8357 Length=9252 Score = 511 bits (566), Expect = 2e-142 Identities = 377/435 (87%), Gaps = 11/435 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 8079 CTTTTGTTCTACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 8020 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct 8019 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 7960 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGT-TCCGCTTCATT 184 | ||| | | |||| | |||| | || | | || || | ||| | || Sbjct 7959 GCGCCG---AAGCGCTTAGATCTAGAAGCAGGGACAG---AGTCCCGCCTCCAAGTAATG 7906 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || ||||||||| |||| ||| ||||||||||||||||| |||||| ||||||||| Sbjct 7905 GAATAAGTAAAACAACGTTAAAAGTAGTGGTATTTCACTTTTGCCGAA---GCTCCCACT 7849 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 7848 TATTCTACACCTCTTAAGTTATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 7789 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 7788 TCTTTCCCCGCTGTTTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 7729 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7728 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 7669 Query 425 TTTGGCTACCTTAAG 439 ||||||||||||||| Sbjct 7668 TTTGGCTACCTTAAG 7654 Score = 172 bits (190), Expect = 2e-40 Identities = 100/102 (98%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7232 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 7173 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540 ||||||||||||||||||||||||||| ||||||||| |||| Sbjct 7172 TCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC-CTTT 7132 >seq6186 Length=11422 Score = 86.0 bits (94), Expect = 2e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 49 TAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 ||||| |||||| |||| ||||||||||||||||||||||||| ||||||| |||| Sbjct 8818 TAGGAAACCTGCATTATATCATAACAGATGTGCCGCCCCAGCCAAATTCCCCACTTGACG 8759 Query 109 ATGTCATCAACCCGGAT 125 ||||| || ||| |||| Sbjct 8758 ATGTCTTCCACCTGGAT 8742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634934688800