Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq8357 612 6e-173 >seq8357 Length=9252 Score = 612 bits (678), Expect = 6e-173 Identities = 443/507 (87%), Gaps = 5/507 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| ||| |||| |||| |||||||||||||||||| Sbjct 2240 GTACTCATTCCAATTACCAGACATGAAAT-GCCCGGTATTGTTATTTATTGTCACTACCT 2182 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2181 CCCCGTATCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2122 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||| Sbjct 2121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCTCCGTCACCCGTTACCACCATGGTA 2062 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||| | || ||||||| Sbjct 2061 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGGAACAGCGCCGGCG 2002 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--GTTG 298 |||||||||||| ||||| ||| ||| |||| ||||| || | || | | || | Sbjct 2001 CAAGGCCATGCGCTTCGTGAAGATATCATGATTCACCGCGGGTCGGGCAAAGCCCGGTCG 1942 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 | |||||||||||| |||| ||||||| |||||| ||| ||| ||| |||||||||| Sbjct 1941 GCCTTTTATCTAATATATACGTCCCTTCCAGAAGTC-GGGATTTACGCACGTATTAGCTC 1883 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 ||||||||| |||||||||| |||||||||||| | ||||||||| ||||||||||||| Sbjct 1882 TAGAATTACTACGGTTATCCGAGTAGTAAGGTACCACCAAATAAACTATAACTGATTTAA 1823 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| Sbjct 1822 TGAGCCATTCGCAGTTTCACAGTATAAGCAGTTTATACTTAGACATGCATGGCTTAATCT 1763 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 1762 TTGAGACAAGCATATGACTACTGGCAG 1736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510154937600